Variables
list	folders = ['config','F','inputFiles']
str	DDfile = 'DD.txt'
str	DDfileTemplate = '../../Library/DislocationDynamics/'+DDfile
str	materialFile = 'W.txt';
str	materialFileTemplate = '../../Library/Materials/'+materialFile;
	b_SI = getValueInFile('inputFiles/'+materialFile,'b_SI')
	h_SI = b_SI/np.sqrt(2.0/3.0)
str	elasticDeformatinoFile = 'ElasticDeformation.txt';
str	elasticDeformatinoFileTemplate = '../../Library/ElasticDeformation/'+elasticDeformatinoFile;
str	meshFile = 'unitCube24.msh';
str	meshFileTemplate = '../../Library/Meshes/'+meshFile;
	pf = PolyCrystalFile(materialFile);
	absoluteTemperature
	alignToSlipSystem0
	boxScaling
	X0
	periodicFaceIDs
str	microstructureFile1 = 'periodicDipoleIndividual.txt';
str	microstructureFileTemplate = '../../Library/Microstructures/'+microstructureFile1;
str	DCfile = 'DefectiveCrystal.txt'
str	DCfileTemplate = '../../Library/DefectiveCrystal/'+DCfile
str	clusterDynamicsFile = 'ClusterDynamics.txt';
str	clusterDynamicsFileTemplate = '../../Library/ClusterDynamics/'+clusterDynamicsFile;
list	microstructureFiles = []
int	microstructureFileID = 1;
str	microstructureName = 'frankLoopsDensity.txt';
str	microstructureFileLocal = 'inputFiles/microstructureFile'+str(microstructureFileID)+'.txt'
	repository = Path(__file__).resolve().parents[2]
	parser = argparse.ArgumentParser(description=__doc__)
	type
	Path
	default
	help
	args = parser.parse_args()
	parents
	True
	exist_ok
str	dcPath = Path('inputFiles')/DCfile
str	dcLines = dcPath.read_text().splitlines(keepends=True)
int	strainRate33 = 1e-8
	grain1globalX1
	grain1globalX3
int	repeatCounts = 5 * np.maximum(1, np.round(pf.boxScaling / (5 * pf.boxEdgesLatticeLengths)))
str	microstructureFile = 'inputFiles/' + microstructureName
	tutorial = Path(__file__).resolve().parent
	boxEdges
int	gridSize = 1024;
int	gridSpacing = 1e-10;
int	boxSize = gridSize*gridSpacing;
str	noiseFile = 'AnalyticalSolidSolutionNoise.txt'
str	noiseFileTemplate = '../../Library/GlidePlaneNoise/'+noiseFile;
	axesLognormalDistributionMean_SI = np.array([20e-9, 20e-9, 1.5e-9])
	axesLognormalDistributionStd_SI = np.zeros(3)
	principalEigenDistortion = np.array([1e-2, -5e-3, 2e-2])
int	totalTargetDensity = 20e19
	patternVector_SI = np.zeros(3)
list	plateletFamilies
	crystalEigenDistortion = crystalAxes @ np.diag(principalEigenDistortion) @ crystalAxes.T
str	inclusionName = 'ellipsoidalInclusionsDensity_' + family + '.txt'
str	inclusionFile = 'inputFiles/' + inclusionName
	rx = np.array([[1., 0., 0.], [0., 0.8, -0.6], [0., 0.6, 0.8]])
	ry = np.array([[0.8, 0., 0.6], [0., 1., 0.], [-0.6, 0., 0.8]])
	rz = np.array([[0.8, -0.6, 0.], [0.6, 0.8, 0.], [0., 0., 1.]])
list	grainOrientations
list	elementaryRotations = [rx, rx.T, ry, ry.T, rz, rz.T]
	orientation = first @ second
float	meshScale = 2.0
	start
list	rows = [' '.join(f'{value:.17g}' for value in row) for row in orientation]
str	p = Path('inputFiles') / DCfile
	lengthSI = pf.F[0, 0] * b_SI

Detailed Description

Generate bicrystal_48 with a prismatic-loop density in both grains.

Generate the uniform-load example with one rotated ellipsoidal inclusion.

Generate a polycrystal with random prismatic loops and 33-direction strain loading.

Generate an empty XY-periodic polycrystal with FEM strain-rate loading in z.

Variable Documentation

◆ absoluteTemperature

generateInputFiles.absoluteTemperature

Definition at line 50 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ alignToSlipSystem0

generateInputFiles.alignToSlipSystem0

Definition at line 52 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ args

generateInputFiles.args = parser.parse_args()

Definition at line 11 of file tutorials/bicrystal/generateInputFiles.py.

◆ axesLognormalDistributionMean_SI

generateInputFiles.axesLognormalDistributionMean_SI = np.array([20e-9, 20e-9, 1.5e-9])

Definition at line 98 of file tutorials/inclusions/generateInputFiles.py.

◆ axesLognormalDistributionStd_SI

generateInputFiles.axesLognormalDistributionStd_SI = np.zeros(3)

Definition at line 99 of file tutorials/inclusions/generateInputFiles.py.

◆ b_SI

generateInputFiles.b_SI = getValueInFile('inputFiles/'+materialFile,'b_SI')

Definition at line 32 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ boxEdges

generateInputFiles.boxEdges

Definition at line 55 of file tutorials/clusterDynamicsFEM/generateInputFiles.py.

◆ boxScaling

generateInputFiles.boxScaling

Definition at line 53 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ boxSize

int generateInputFiles.boxSize = gridSize*gridSpacing;

Definition at line 28 of file tutorials/dipoleNoise/generateInputFiles.py.

◆ clusterDynamicsFile

str generateInputFiles.clusterDynamicsFile = 'ClusterDynamics.txt';

Definition at line 63 of file tutorials/annealing/generateInputFiles.py.

◆ clusterDynamicsFileTemplate

str generateInputFiles.clusterDynamicsFileTemplate = '../../Library/ClusterDynamics/'+clusterDynamicsFile;

Definition at line 64 of file tutorials/annealing/generateInputFiles.py.

◆ crystalEigenDistortion

generateInputFiles.crystalEigenDistortion = crystalAxes @ np.diag(principalEigenDistortion) @ crystalAxes.T

Definition at line 129 of file tutorials/inclusions/generateInputFiles.py.

◆ DCfile

str generateInputFiles.DCfile = 'DefectiveCrystal.txt'

Definition at line 18 of file tutorials/annealing/generateInputFiles.py.

◆ DCfileTemplate

str generateInputFiles.DCfileTemplate = '../../Library/DefectiveCrystal/'+DCfile

Definition at line 19 of file tutorials/annealing/generateInputFiles.py.

◆ dcLines

str generateInputFiles.dcLines = dcPath.read_text().splitlines(keepends=True)

Definition at line 38 of file tutorials/bicrystal/generateInputFiles.py.

◆ dcPath

str generateInputFiles.dcPath = Path('inputFiles')/DCfile

Definition at line 37 of file tutorials/bicrystal/generateInputFiles.py.

◆ DDfile

str generateInputFiles.DDfile = 'DD.txt'

Definition at line 12 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ DDfileTemplate

str generateInputFiles.DDfileTemplate = '../../Library/DislocationDynamics/'+DDfile

Definition at line 13 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ default

generateInputFiles.default

Definition at line 9 of file tutorials/bicrystal/generateInputFiles.py.

◆ elasticDeformatinoFile

str generateInputFiles.elasticDeformatinoFile = 'ElasticDeformation.txt';

Definition at line 37 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ elasticDeformatinoFileTemplate

str generateInputFiles.elasticDeformatinoFileTemplate = '../../Library/ElasticDeformation/'+elasticDeformatinoFile;

Definition at line 38 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ elementaryRotations

list generateInputFiles.elementaryRotations = [rx, rx.T, ry, ry.T, rz, rz.T]

Definition at line 101 of file tutorials/polycrystal/generateInputFiles.py.

◆ exist_ok

generateInputFiles.exist_ok

Definition at line 12 of file tutorials/bicrystal/generateInputFiles.py.

◆ folders

list generateInputFiles.folders = ['config','F','inputFiles']

Definition at line 6 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ grain1globalX1

generateInputFiles.grain1globalX1

Definition at line 90 of file tutorials/bicrystal/generateInputFiles.py.

◆ grain1globalX3

generateInputFiles.grain1globalX3

Definition at line 91 of file tutorials/bicrystal/generateInputFiles.py.

◆ grainOrientations

list generateInputFiles.grainOrientations

Initial value:

1= [np.eye(3), rx, rx.T, ry, ry.T, rz, rz.T,

2 rx @ ry, ry @ rz, rz @ rx]

Definition at line 97 of file tutorials/polycrystal/generateInputFiles.py.

◆ gridSize

int generateInputFiles.gridSize = 1024;

Definition at line 26 of file tutorials/dipoleNoise/generateInputFiles.py.

◆ gridSpacing

int generateInputFiles.gridSpacing = 1e-10;

Definition at line 27 of file tutorials/dipoleNoise/generateInputFiles.py.

◆ h_SI

generateInputFiles.h_SI = b_SI/np.sqrt(2.0/3.0)

Definition at line 33 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ help

generateInputFiles.help

Definition at line 10 of file tutorials/bicrystal/generateInputFiles.py.

◆ inclusionFile

str generateInputFiles.inclusionFile = 'inputFiles/' + inclusionName

Definition at line 131 of file tutorials/inclusions/generateInputFiles.py.

◆ inclusionName

str generateInputFiles.inclusionName = 'ellipsoidalInclusionsDensity_' + family + '.txt'

Definition at line 130 of file tutorials/inclusions/generateInputFiles.py.

◆ lengthSI

generateInputFiles.lengthSI = pf.F[0, 0] * b_SI

Definition at line 119 of file tutorials/polycrystalFEM/generateInputFiles.py.

◆ materialFile

str generateInputFiles.materialFile = 'W.txt';

Definition at line 29 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ materialFileTemplate

str generateInputFiles.materialFileTemplate = '../../Library/Materials/'+materialFile;

Definition at line 30 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ meshFile

str generateInputFiles.meshFile = 'unitCube24.msh';

Definition at line 45 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ meshFileTemplate

str generateInputFiles.meshFileTemplate = '../../Library/Meshes/'+meshFile;

Definition at line 46 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ meshScale

float generateInputFiles.meshScale = 2.0

Definition at line 115 of file tutorials/polycrystal/generateInputFiles.py.

◆ microstructureFile

str generateInputFiles.microstructureFile = 'inputFiles/' + microstructureName

Definition at line 109 of file tutorials/bicrystal/generateInputFiles.py.

◆ microstructureFile1

str generateInputFiles.microstructureFile1 = 'periodicDipoleIndividual.txt';

Definition at line 60 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ microstructureFileID

int generateInputFiles.microstructureFileID = 1;

Definition at line 83 of file tutorials/annealing/generateInputFiles.py.

◆ microstructureFileLocal

str generateInputFiles.microstructureFileLocal = 'inputFiles/microstructureFile'+str(microstructureFileID)+'.txt'

Definition at line 86 of file tutorials/annealing/generateInputFiles.py.

◆ microstructureFiles

list generateInputFiles.microstructureFiles = []

Definition at line 81 of file tutorials/annealing/generateInputFiles.py.

◆ microstructureFileTemplate

str generateInputFiles.microstructureFileTemplate = '../../Library/Microstructures/'+microstructureFile1;

Definition at line 61 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ microstructureName

str generateInputFiles.microstructureName = 'frankLoopsDensity.txt';

Definition at line 84 of file tutorials/annealing/generateInputFiles.py.

◆ noiseFile

str generateInputFiles.noiseFile = 'AnalyticalSolidSolutionNoise.txt'

Definition at line 30 of file tutorials/dipoleNoise/generateInputFiles.py.

◆ noiseFileTemplate

str generateInputFiles.noiseFileTemplate = '../../Library/GlidePlaneNoise/'+noiseFile;

Definition at line 31 of file tutorials/dipoleNoise/generateInputFiles.py.

◆ orientation

generateInputFiles.orientation = first @ second

Definition at line 104 of file tutorials/polycrystal/generateInputFiles.py.

◆ p

str generateInputFiles.p = Path('inputFiles') / DCfile

Definition at line 37 of file tutorials/polycrystalFEM/generateInputFiles.py.

◆ parents

generateInputFiles.parents

Definition at line 12 of file tutorials/bicrystal/generateInputFiles.py.

◆ parser

generateInputFiles.parser = argparse.ArgumentParser(description=__doc__)

Definition at line 8 of file tutorials/bicrystal/generateInputFiles.py.

◆ Path

generateInputFiles.Path

Definition at line 9 of file tutorials/bicrystal/generateInputFiles.py.

◆ patternVector_SI

generateInputFiles.patternVector_SI = np.zeros(3)

Definition at line 121 of file tutorials/inclusions/generateInputFiles.py.

◆ periodicFaceIDs

generateInputFiles.periodicFaceIDs

Definition at line 55 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ pf

generateInputFiles.pf = PolyCrystalFile(materialFile);

Definition at line 49 of file testsPy/periodicEnergy/generateInputFiles.py.

◆ plateletFamilies

list generateInputFiles.plateletFamilies

Initial value:

=  [
    ('100', np.array([[0., 0., 1.], [1., 0., 0.], [0., 1., 0.]])),
    ('010', np.array([[0., 1., 0.], [0., 0., 1.], [1., 0., 0.]])),
    ('001', np.eye(3)),
]